TKroneckerLL Class Reference

!!!!! MYUNGHWAN, CHECK! More...

List of all members.

Public Member Functions
	TKroneckerLL ()
	TKroneckerLL (const PNGraph &GraphPt, const TFltV &ParamV, const double &PermPSwapNd=0.2)
	TKroneckerLL (const PNGraph &GraphPt, const TKronMtx &ParamMtx, const double &PermPSwapNd=0.2)
	TKroneckerLL (const PNGraph &GraphPt, const TKronMtx &ParamMtx, const TIntV &NodeIdPermV, const double &PermPSwapNd=0.2)
int	GetNodes () const
int	GetKronIters () const
PNGraph	GetGraph () const
void	SetGraph (const PNGraph &GraphPt)
const TKronMtx &	GetProbMtx () const
const TKronMtx &	GetLLMtx () const
int	GetParams () const
int	GetDim () const
void	SetDebug (const bool Debug)
const TFltV &	GetLLHist () const
const TVec< TKronMtx > &	GetParamHist () const
bool	IsObsNode (const int &NId) const
bool	IsObsEdge (const int &NId1, const int &NId2) const
bool	IsLatentNode (const int &NId) const
bool	IsLatentEdge (const int &NId1, const int &NId2) const
void	SetPerm (const char &PermId)
void	SetOrderPerm ()
void	SetRndPerm ()
void	SetDegPerm ()
void	SetBestDegPerm ()
	!!!!! MYUNGHWAN, CHECK!
void	SetPerm (const TIntV &NodePermV)
void	SetIPerm (const TIntV &Perm)
	!!!!! MYUNGHWAN, CHECK!
const TIntV &	GetPermV () const
void	AppendIsoNodes ()
void	RestoreGraph (const bool RestoreNodes=true)
	!!!!! MYUNGHWAN, CHECK!
double	GetFullGraphLL () const
double	GetFullRowLL (int RowId) const
double	GetFullColLL (int ColId) const
double	GetEmptyGraphLL () const
double	GetApxEmptyGraphLL () const
void	InitLL (const TFltV &ParamV)
void	InitLL (const TKronMtx &ParamMtx)
void	InitLL (const PNGraph &GraphPt, const TKronMtx &ParamMtx)
double	CalcGraphLL ()
double	CalcApxGraphLL ()
double	GetLL () const
double	GetAbsErr () const
double	NodeLLDelta (const int &NId) const
double	SwapNodesLL (const int &NId1, const int &NId2)
bool	SampleNextPerm (int &NId1, int &NId2)
double	GetEmptyGraphDLL (const int &ParamId) const
double	GetApxEmptyGraphDLL (const int &ParamId) const
const TFltV &	CalcGraphDLL ()
const TFltV &	CalcFullApxGraphDLL ()
const TFltV &	CalcApxGraphDLL ()
double	NodeDLLDelta (const int ParamId, const int &NId) const
void	UpdateGraphDLL (const int &SwapNId1, const int &SwapNId2)
const TFltV &	GetDLL () const
double	GetDLL (const int &ParamId) const
void	SampleGradient (const int &WarmUp, const int &NSamples, double &AvgLL, TFltV &GradV)
double	GradDescent (const int &NIter, const double &LrnRate, double MnStep, double MxStep, const int &WarmUp, const int &NSamples)
double	GradDescent2 (const int &NIter, const double &LrnRate, double MnStep, double MxStep, const int &WarmUp, const int &NSamples)
void	SetRandomEdges (const int &NEdges, const bool isDir=true)
	!!!!! MYUNGHWAN, CHECK!
void	MetroGibbsSampleSetup (const int &WarmUp)
void	MetroGibbsSampleNext (const int &WarmUp, const bool DLLUpdate=false)
void	RunEStep (const int &GibbsWarmUp, const int &WarmUp, const int &NSamples, TFltV &LLV, TVec< TFltV > &DLLV)
double	RunMStep (const TFltV &LLV, const TVec< TFltV > &DLLV, const int &GradIter, const double &LrnRate, double MnStep, double MxStep)
void	RunKronEM (const int &EMIter, const int &GradIter, double LrnRate, double MnStep, double MxStep, const int &GibbsWarmUp, const int &WarmUp, const int &NSamples, const TKronEMType &Type=kronNodeMiss, const int &NMissing=-1)
TFltV	TestSamplePerm (const TStr &OutFNm, const int &WarmUp, const int &NSamples, const TKronMtx &TrueMtx, const bool &DoPlot=true)
TFltQu	TestKronDescent (const bool &DoExact, const bool &TruePerm, double LearnRate, const int &WarmUp, const int &NSamples, const TKronMtx &TrueParam)
void	GradDescentConvergence (const TStr &OutFNm, const TStr &Desc1, const bool &SamplePerm, const int &NIters, double LearnRate, const int &WarmUp, const int &NSamples, const int &AvgKGraphs, const TKronMtx &TrueParam)
Static Public Member Functions
static PKroneckerLL	New ()
static PKroneckerLL	New (const PNGraph &GraphPt, const TKronMtx &ParamMtx, const double &PermPSwapNd=0.1)
static PKroneckerLL	New (const PNGraph &GraphPt, const TKronMtx &ParamMtx, const TIntV &NodeIdPermV, const double &PermPSwapNd=0.2)
static double	CalcChainR2 (const TVec< TFltV > &ChainLLV)
static void	ChainGelmapRubinPlot (const TVec< TFltV > &ChainLLV, const TStr &OutFNm, const TStr &Desc)
static void	TestBicCriterion (const TStr &OutFNm, const TStr &Desc1, const PNGraph &G, const int &GradIters, double LearnRate, const int &WarmUp, const int &NSamples, const int &TrueN0)
static void	TestGradDescent (const int &KronIters, const int &KiloSamples, const TStr &Permutation)
Friends
class	TPt< TKroneckerLL >

---

Detailed Description

!!!!! MYUNGHWAN, CHECK!

---

Constructor & Destructor Documentation

TKroneckerLL::TKroneckerLL

(

)

[inline]

TKroneckerLL::TKroneckerLL	(	const PNGraph &	GraphPt,
		const TFltV &	ParamV,
		const double &	PermPSwapNd = 0.2
	)

TKroneckerLL::TKroneckerLL	(	const PNGraph &	GraphPt,
		const TKronMtx &	ParamMtx,
		const double &	PermPSwapNd = 0.2
	)

TKroneckerLL::TKroneckerLL	(	const PNGraph &	GraphPt,
		const TKronMtx &	ParamMtx,
		const TIntV &	NodeIdPermV,
		const double &	PermPSwapNd = 0.2
	)

---

Member Function Documentation

void TKroneckerLL::AppendIsoNodes

(

)

const TFltV & TKroneckerLL::CalcApxGraphDLL

(

)

double TKroneckerLL::CalcApxGraphLL

(

)

double TKroneckerLL::CalcChainR2

(

const TVec< TFltV > &

ChainLLV

)

[static]

const TFltV & TKroneckerLL::CalcFullApxGraphDLL

(

)

const TFltV & TKroneckerLL::CalcGraphDLL

(

)

double TKroneckerLL::CalcGraphLL

(

)

void TKroneckerLL::ChainGelmapRubinPlot	(	const TVec< TFltV > &	ChainLLV,
		const TStr &	OutFNm,
		const TStr &	Desc
	)		[static]

double TKroneckerLL::GetAbsErr

(

)

const [inline]

double TKroneckerLL::GetApxEmptyGraphDLL

(

const int &

ParamId

)

const

double TKroneckerLL::GetApxEmptyGraphLL

(

)

const

int TKroneckerLL::GetDim

(

)

const [inline]

const TFltV& TKroneckerLL::GetDLL

(

)

const [inline]

double TKroneckerLL::GetDLL

(

const int &

ParamId

)

const [inline]

double TKroneckerLL::GetEmptyGraphDLL

(

const int &

ParamId

)

const

double TKroneckerLL::GetEmptyGraphLL

(

)

const

double TKroneckerLL::GetFullColLL

(

int

ColId

)

const

double TKroneckerLL::GetFullGraphLL

(

)

const

double TKroneckerLL::GetFullRowLL

(

int

RowId

)

const

PNGraph TKroneckerLL::GetGraph

(

)

const [inline]

int TKroneckerLL::GetKronIters

(

)

const [inline]

double TKroneckerLL::GetLL

(

)

const [inline]

const TFltV& TKroneckerLL::GetLLHist

(

)

const [inline]

const TKronMtx& TKroneckerLL::GetLLMtx

(

)

const [inline]

int TKroneckerLL::GetNodes

(

)

const [inline]

const TVec<TKronMtx>& TKroneckerLL::GetParamHist

(

)

const [inline]

int TKroneckerLL::GetParams

(

)

const [inline]

const TIntV& TKroneckerLL::GetPermV

(

)

const [inline]

const TKronMtx& TKroneckerLL::GetProbMtx

(

)

const [inline]

double TKroneckerLL::GradDescent	(	const int &	NIter,
		const double &	LrnRate,
		double	MnStep,
		double	MxStep,
		const int &	WarmUp,
		const int &	NSamples
	)

!!!!! MYUNGHWAN, CHECK!

!!!!! MYUNGHWAN, CHECK!

double TKroneckerLL::GradDescent2	(	const int &	NIter,
		const double &	LrnRate,
		double	MnStep,
		double	MxStep,
		const int &	WarmUp,
		const int &	NSamples
	)

void TKroneckerLL::GradDescentConvergence	(	const TStr &	OutFNm,
		const TStr &	Desc1,
		const bool &	SamplePerm,
		const int &	NIters,
		double	LearnRate,
		const int &	WarmUp,
		const int &	NSamples,
		const int &	AvgKGraphs,
		const TKronMtx &	TrueParam
	)

void TKroneckerLL::InitLL

(

const TFltV &

ParamV

)

void TKroneckerLL::InitLL

(

const TKronMtx &

ParamMtx

)

void TKroneckerLL::InitLL	(	const PNGraph &	GraphPt,
		const TKronMtx &	ParamMtx
	)

bool TKroneckerLL::IsLatentEdge	(	const int &	NId1,
		const int &	NId2
	)		const [inline]

bool TKroneckerLL::IsLatentNode

(

const int &

NId

)

const [inline]

bool TKroneckerLL::IsObsEdge	(	const int &	NId1,
		const int &	NId2
	)		const [inline]

bool TKroneckerLL::IsObsNode

(

const int &

NId

)

const [inline]

void TKroneckerLL::MetroGibbsSampleNext	(	const int &	WarmUp,
		const bool	DLLUpdate = false
	)

void TKroneckerLL::MetroGibbsSampleSetup

(

const int &

WarmUp

)

static PKroneckerLL TKroneckerLL::New

(

)

[inline, static]

PKroneckerLL TKroneckerLL::New	(	const PNGraph &	GraphPt,
		const TKronMtx &	ParamMtx,
		const double &	PermPSwapNd = 0.1
	)		[static]

PKroneckerLL TKroneckerLL::New	(	const PNGraph &	GraphPt,
		const TKronMtx &	ParamMtx,
		const TIntV &	NodeIdPermV,
		const double &	PermPSwapNd = 0.2
	)		[static]

double TKroneckerLL::NodeDLLDelta	(	const int	ParamId,
		const int &	NId
	)		const

double TKroneckerLL::NodeLLDelta

(

const int &

NId

)

const

void TKroneckerLL::RestoreGraph

(

const bool

RestoreNodes = true

)

!!!!! MYUNGHWAN, CHECK!

void TKroneckerLL::RunEStep	(	const int &	GibbsWarmUp,
		const int &	WarmUp,
		const int &	NSamples,
		TFltV &	LLV,
		TVec< TFltV > &	DLLV
	)

void TKroneckerLL::RunKronEM	(	const int &	EMIter,
		const int &	GradIter,
		double	LrnRate,
		double	MnStep,
		double	MxStep,
		const int &	GibbsWarmUp,
		const int &	WarmUp,
		const int &	NSamples,
		const TKronEMType &	Type = kronNodeMiss,
		const int &	NMissing = -1
	)

double TKroneckerLL::RunMStep	(	const TFltV &	LLV,
		const TVec< TFltV > &	DLLV,
		const int &	GradIter,
		const double &	LrnRate,
		double	MnStep,
		double	MxStep
	)

void TKroneckerLL::SampleGradient	(	const int &	WarmUp,
		const int &	NSamples,
		double &	AvgLL,
		TFltV &	GradV
	)

bool TKroneckerLL::SampleNextPerm	(	int &	NId1,
		int &	NId2
	)

void TKroneckerLL::SetBestDegPerm

(

)

!!!!! MYUNGHWAN, CHECK!

void TKroneckerLL::SetDebug

(

const bool

Debug

)

[inline]

void TKroneckerLL::SetDegPerm

(

)

void TKroneckerLL::SetGraph

(

const PNGraph &

GraphPt

)

void TKroneckerLL::SetIPerm

(

const TIntV &

Perm

)

!!!!! MYUNGHWAN, CHECK!

void TKroneckerLL::SetOrderPerm

(

)

void TKroneckerLL::SetPerm

(

const char &

PermId

)

void TKroneckerLL::SetPerm

(

const TIntV &

NodePermV

)

[inline]

void TKroneckerLL::SetRandomEdges	(	const int &	NEdges,
		const bool	isDir = true
	)

!!!!! MYUNGHWAN, CHECK!

void TKroneckerLL::SetRndPerm

(

)

double TKroneckerLL::SwapNodesLL	(	const int &	NId1,
		const int &	NId2
	)

void TKroneckerLL::TestBicCriterion	(	const TStr &	OutFNm,
		const TStr &	Desc1,
		const PNGraph &	G,
		const int &	GradIters,
		double	LearnRate,
		const int &	WarmUp,
		const int &	NSamples,
		const int &	TrueN0
	)		[static]

void TKroneckerLL::TestGradDescent	(	const int &	KronIters,
		const int &	KiloSamples,
		const TStr &	Permutation
	)		[static]

TFltQu TKroneckerLL::TestKronDescent	(	const bool &	DoExact,
		const bool &	TruePerm,
		double	LearnRate,
		const int &	WarmUp,
		const int &	NSamples,
		const TKronMtx &	TrueParam
	)

TFltV TKroneckerLL::TestSamplePerm	(	const TStr &	OutFNm,
		const int &	WarmUp,
		const int &	NSamples,
		const TKronMtx &	TrueMtx,
		const bool &	DoPlot = true
	)

void TKroneckerLL::UpdateGraphDLL	(	const int &	SwapNId1,
		const int &	SwapNId2
	)

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Friends And Related Function Documentation

friend class TPt< TKroneckerLL > [friend]

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The documentation for this class was generated from the following files:

• snap-adv/kronecker.h
• snap-adv/kronecker.cpp