SNAP Library 3.0, User Reference
2016-07-20 17:56:49
SNAP, a general purpose, high performance system for analysis and manipulation of large networks
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Directed graph for multi-threaded operations. More...
#include <graphmp.h>
Classes | |
class | TEdgeI |
Edge iterator. Only forward iteration (operator++) is supported. More... | |
class | TNode |
class | TNodeI |
Node iterator. Only forward iteration (operator++) is supported. More... | |
Public Types | |
typedef TNGraphMP | TNet |
typedef TPt< TNGraphMP > | PNet |
Public Member Functions | |
TNGraphMP () | |
TNGraphMP (const int &Nodes, const int &Edges) | |
Constructor that reserves enough memory for a graph of Nodes nodes and Edges edges. More... | |
TNGraphMP (const TNGraphMP &Graph) | |
TNGraphMP (TSIn &SIn) | |
Constructor that loads the graph from a (binary) stream SIn. More... | |
void | Save (TSOut &SOut) const |
Saves the graph to a (binary) stream SOut. More... | |
bool | HasFlag (const TGraphFlag &Flag) const |
Allows for run-time checking the type of the graph (see the TGraphFlag for flags). More... | |
TNGraphMP & | operator= (const TNGraphMP &Graph) |
int | GetNodes () const |
Returns the number of nodes in the graph. More... | |
void | SetNodes (const int &Length) |
Sets the number of nodes in the graph. More... | |
int | AddNode (int NId=-1) |
Adds a node of ID NId to the graph. More... | |
int | AddNodeUnchecked (int NId=-1) |
Adds a node of ID NId to the graph without performing checks. More... | |
int | AddNode (const TNodeI &NodeId) |
Adds a node of ID NodeI.GetId() to the graph. More... | |
int | AddNode (const int &NId, const TIntV &InNIdV, const TIntV &OutNIdV) |
Adds a node of ID NId to the graph, creates edges to the node from all nodes in vector InNIdV, creates edges from the node to all nodes in vector OutNIdV. More... | |
int | AddNode (const int &NId, const TVecPool< TInt > &Pool, const int &SrcVId, const int &DstVId) |
Adds a node of ID NId to the graph, creates edges to the node from all nodes in vector InNIdV in the vector pool Pool, creates edges from the node to all nodes in vector OutNIdVin the vector pool Pool . More... | |
void | DelNode (const int &NId) |
Deletes node of ID NId from the graph. More... | |
void | DelNode (const TNode &NodeI) |
Deletes node of ID NodeI.GetId() from the graph. More... | |
bool | IsNode (const int &NId) const |
Tests whether ID NId is a node. More... | |
TNodeI | BegNI () const |
Returns an iterator referring to the first node in the graph. More... | |
TNodeI | EndNI () const |
Returns an iterator referring to the past-the-end node in the graph. More... | |
TNodeI | GetNI (const int &NId) const |
Returns an iterator referring to the node of ID NId in the graph. More... | |
int | GetMxNId () const |
Returns the maximum id of a any node in the graph. More... | |
int | Reserved () const |
int | GetEdges () const |
Returns the number of edges in the graph. More... | |
int | AddEdge (const int &SrcNId, const int &DstNId) |
Adds an edge from node IDs SrcNId to node DstNId to the graph. More... | |
int | AddEdgeUnchecked (const int &SrcNId, const int &DstNId) |
Adds an edge from node IDs SrcNId to node DstNId to the graph without performing checks. More... | |
int | AddEdge (const TEdgeI &EdgeI) |
Adds an edge from EdgeI.GetSrcNId() to EdgeI.GetDstNId() to the graph. More... | |
int | AddOutEdge1 (int &SrcIdx, const int &SrcNId, const int &DstNId) |
int | AddInEdge1 (int &DstIdx, const int &SrcNId, const int &DstNId) |
void | AddOutEdge2 (const int &SrcNId, const int &DstNId) |
void | AddInEdge2 (const int &SrcNId, const int &DstNId) |
void | AddNodeWithEdges (const TInt &NId, TIntV &InNIdV, TIntV &OutNIdV) |
Adds a node of ID NId to the graph, creates edges to the node from all nodes in vector InNIdV, creates edges from the node to all nodes in vector OutNIdV. More... | |
void | DelEdge (const int &SrcNId, const int &DstNId, const bool &IsDir=true) |
Deletes an edge from node IDs SrcNId to DstNId from the graph. More... | |
bool | IsEdge (const int &SrcNId, const int &DstNId, const bool &IsDir=true) const |
Tests whether an edge from node IDs SrcNId to DstNId exists in the graph. More... | |
TEdgeI | BegEI () const |
Returns an iterator referring to the first edge in the graph. More... | |
TEdgeI | EndEI () const |
Returns an iterator referring to the past-the-end edge in the graph. More... | |
TEdgeI | GetEI (const int &SrcNId, const int &DstNId) const |
Returns an iterator referring to edge (SrcNId, DstNId) in the graph. More... | |
int | GetRndNId (TRnd &Rnd=TInt::Rnd) |
Returns an ID of a random node in the graph. More... | |
TNodeI | GetRndNI (TRnd &Rnd=TInt::Rnd) |
Returns an interator referring to a random node in the graph. More... | |
void | GetNIdV (TIntV &NIdV) const |
Gets a vector IDs of all nodes in the graph. More... | |
bool | Empty () const |
Tests whether the graph is empty (has zero nodes). More... | |
void | Clr () |
Deletes all nodes and edges from the graph. More... | |
void | Reserve (const int &Nodes, const int &Edges) |
Reserves memory for a graph of Nodes nodes and Edges edges. More... | |
void | ReserveNodeDegs (const int &Idx, const int &InDeg, const int &OutDeg) |
Reserves memory for node Idx having InDeg in-edges and OutDeg out-edges. More... | |
void | ReserveNIdInDeg (const int &NId, const int &InDeg) |
Reserves memory for node ID NId having InDeg in-edges. More... | |
void | ReserveNIdOutDeg (const int &NId, const int &OutDeg) |
Reserves memory for node ID NId having OutDeg out-edges. More... | |
void | SortEdges (const int &Idx, const int &InDeg, const int &OutDeg) |
Sorts in-edges and out-edges. More... | |
void | SortNodeAdjV () |
Sorts the adjacency lists of each node. More... | |
void | Defrag (const bool &OnlyNodeLinks=false) |
Defragments the graph. More... | |
bool | IsOk (const bool &ThrowExcept=true) const |
Checks the graph data structure for internal consistency. More... | |
void | Dump (FILE *OutF=stdout) const |
Print the graph in a human readable form to an output stream OutF. More... | |
Static Public Member Functions | |
static PNGraphMP | New () |
Static constructor that returns a pointer to the graph. Call: PNGraphMP Graph = TNGraphMP::New(). More... | |
static PNGraphMP | New (const int &Nodes, const int &Edges) |
Static constructor that returns a pointer to the graph and reserves enough memory for Nodes nodes and Edges edges. More... | |
static PNGraphMP | Load (TSIn &SIn) |
Static constructor that loads the graph from a stream SIn and returns a pointer to it. More... | |
static PNGraphMP | GetSmallGraph () |
Returns a small graph on 5 nodes and 6 edges. More... | |
Private Member Functions | |
TNode & | GetNode (const int &NId) |
const TNode & | GetNode (const int &NId) const |
Private Attributes | |
TCRef | CRef |
TInt | MxNId |
THashMP< TInt, TNode > | NodeH |
Friends | |
class | TPt< TNGraphMP > |
class | TNGraphMPMtx |
Directed graph for multi-threaded operations.
Node IDs can be arbitrary non-negative integers. Nodes and edges have no attributes/data associated with them. There is at most one directed edge from one source node to a destination node. There can be an edge between the same pair of nodes in the opposite direction. Self loops (one per node) are allowed but multiple (parallel) edges are not. The directed graph data structure is implemented using sorted adjacency lists. This means adding a node takes constant time, while adding an edge takes linear time (since adjacency list is kept sorted) in the node degree. Accessing arbitrary node takes constant time and accessing any edge takes logarithmic time in the node degree.
typedef TPt<TNGraphMP> TNGraphMP::PNet |
typedef TNGraphMP TNGraphMP::TNet |
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Constructor that reserves enough memory for a graph of Nodes nodes and Edges edges.
Definition at line 131 of file graphmp.h.
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int TNGraphMP::AddEdge | ( | const int & | SrcNId, |
const int & | DstNId | ||
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Adds an edge from node IDs SrcNId to node DstNId to the graph.
If the edge already exists return -2. If the edge was successfully added return -1. Normally the function should return an ID of the edge added but since edges in TNGraphMP have no IDs we return -1. Function aborts if SrcNId or DstNId are not nodes in the graph.
Definition at line 97 of file graphmp.cpp.
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Adds an edge from EdgeI.GetSrcNId() to EdgeI.GetDstNId() to the graph.
Definition at line 218 of file graphmp.h.
int TNGraphMP::AddEdgeUnchecked | ( | const int & | SrcNId, |
const int & | DstNId | ||
) |
Adds an edge from node IDs SrcNId to node DstNId to the graph without performing checks.
Definition at line 106 of file graphmp.cpp.
int TNGraphMP::AddInEdge1 | ( | int & | DstIdx, |
const int & | SrcNId, | ||
const int & | DstNId | ||
) |
Definition at line 253 of file graphmp.cpp.
void TNGraphMP::AddInEdge2 | ( | const int & | SrcNId, |
const int & | DstNId | ||
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Definition at line 276 of file graphmp.cpp.
int TNGraphMP::AddNode | ( | int | NId = -1 | ) |
Adds a node of ID NId to the graph.
Returns the ID of the node being added. If NId is -1, node ID is automatically assigned. Aborts, if a node with ID NId already exists.
Definition at line 10 of file graphmp.cpp.
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Adds a node of ID NodeI.GetId() to the graph.
Definition at line 163 of file graphmp.h.
Adds a node of ID NId to the graph, creates edges to the node from all nodes in vector InNIdV, creates edges from the node to all nodes in vector OutNIdV.
Returns the ID of the node being added. If NId is -1, node ID is automatically assigned. Aborts, if a node with ID NId already exists.
The operation can create inconsistent graphs when the neighboring nodes in vectors InNIdV and OutNIdV do not exist. Use TNGraphMP::IsOk to check that the resulting graph is consistent after the operation.
Definition at line 30 of file graphmp.cpp.
int TNGraphMP::AddNode | ( | const int & | NId, |
const TVecPool< TInt > & | Pool, | ||
const int & | SrcVId, | ||
const int & | DstVId | ||
) |
Adds a node of ID NId to the graph, creates edges to the node from all nodes in vector InNIdV in the vector pool Pool, creates edges from the node to all nodes in vector OutNIdVin the vector pool Pool .
Returns the ID of the node being added. If NId is -1, node ID is automatically assigned. Aborts, if a node with ID NId already exists.
The operation can create inconsistent graphs when the neighboring nodes stored in the Pool vector are not explicitly added to the graph. Use TNGraphMP::IsOk to check that the resulting graph is consistent.
Definition at line 50 of file graphmp.cpp.
int TNGraphMP::AddNodeUnchecked | ( | int | NId = -1 | ) |
Adds a node of ID NId to the graph without performing checks.
Definition at line 21 of file graphmp.cpp.
Adds a node of ID NId to the graph, creates edges to the node from all nodes in vector InNIdV, creates edges from the node to all nodes in vector OutNIdV.
Definition at line 282 of file graphmp.cpp.
int TNGraphMP::AddOutEdge1 | ( | int & | SrcIdx, |
const int & | SrcNId, | ||
const int & | DstNId | ||
) |
Definition at line 234 of file graphmp.cpp.
void TNGraphMP::AddOutEdge2 | ( | const int & | SrcNId, |
const int & | DstNId | ||
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Definition at line 272 of file graphmp.cpp.
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Returns an iterator referring to the first edge in the graph.
Definition at line 236 of file graphmp.h.
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void TNGraphMP::Defrag | ( | const bool & | OnlyNodeLinks = false | ) |
Defragments the graph.
After performing many node and edge insertions and deletions to a graph, the graph data structure will be fragmented in memory. This function compacts down the graph data structure and frees unneeded memory.
Definition at line 149 of file graphmp.cpp.
void TNGraphMP::DelEdge | ( | const int & | SrcNId, |
const int & | DstNId, | ||
const bool & | IsDir = true |
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Deletes an edge from node IDs SrcNId to DstNId from the graph.
If the edge (SrcNId, DstNId) does not exist in the graph function still completes. But the function aborts if SrcNId or DstNId are not nodes in the graph.
Definition at line 112 of file graphmp.cpp.
void TNGraphMP::DelNode | ( | const int & | NId | ) |
Deletes node of ID NId from the graph.
If the node of ID NId does not exist the function aborts.
Definition at line 68 of file graphmp.cpp.
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Deletes node of ID NodeI.GetId() from the graph.
Definition at line 190 of file graphmp.h.
void TNGraphMP::Dump | ( | FILE * | OutF = stdout | ) | const |
Print the graph in a human readable form to an output stream OutF.
Definition at line 206 of file graphmp.cpp.
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Tests whether the graph is empty (has zero nodes).
Definition at line 252 of file graphmp.h.
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Returns an iterator referring to the past-the-end edge in the graph.
Definition at line 238 of file graphmp.h.
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int TNGraphMP::GetEdges | ( | ) | const |
TNGraphMP::TEdgeI TNGraphMP::GetEI | ( | const int & | SrcNId, |
const int & | DstNId | ||
) | const |
Returns an iterator referring to edge (SrcNId, DstNId) in the graph.
Definition at line 136 of file graphmp.cpp.
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void TNGraphMP::GetNIdV | ( | TIntV & | NIdV | ) | const |
Gets a vector IDs of all nodes in the graph.
Definition at line 143 of file graphmp.cpp.
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Returns an interator referring to a random node in the graph.
Definition at line 247 of file graphmp.h.
Returns an ID of a random node in the graph.
Definition at line 245 of file graphmp.h.
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Returns a small graph on 5 nodes and 6 edges.
/// Edges: 0 -> 1, 1 -> 2, 0 -> 2, 1 -> 3, 3 -> 4, 2 -> 3 ///
Definition at line 223 of file graphmp.cpp.
bool TNGraphMP::HasFlag | ( | const TGraphFlag & | Flag | ) | const |
Allows for run-time checking the type of the graph (see the TGraphFlag for flags).
Definition at line 6 of file graphmp.cpp.
bool TNGraphMP::IsEdge | ( | const int & | SrcNId, |
const int & | DstNId, | ||
const bool & | IsDir = true |
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Tests whether an edge from node IDs SrcNId to DstNId exists in the graph.
Definition at line 130 of file graphmp.cpp.
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bool TNGraphMP::IsOk | ( | const bool & | ThrowExcept = true | ) | const |
Checks the graph data structure for internal consistency.
For each node in the graph check that its neighbors are also nodes in the graph.
Definition at line 160 of file graphmp.cpp.
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Static constructor that returns a pointer to the graph. Call: PNGraphMP Graph = TNGraphMP::New().
Definition at line 138 of file graphmp.h.
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Sorts the adjacency lists of each node.
Definition at line 266 of file graphmp.h.